Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08409 Hydroxydesmthyl doxepin glucuronide 471.1930 472.1991 113
P09805 ES 242-1 604.2235 605.2299 113
P11463 5-Megastigmen-7-yne-3,9-diol 9-glucoside 370.1959 371.2038 113
P12004 N-(1-Deoxy-1-fructosyl)tyrosine 343.1239 344.1305 113
P12768 883.3117 884.3193 113
P18966 Notoamide H 479.2104 480.2136 113
P19107 862.2377 863.2433 113
P20003 14,15-Dihydroxygelsenicine 358.1544 359.1638 113
P20634 Euphoscopin F 538.2526 539.2633 113
P22004 (E)-2-Tridecene-4,6,8-triyn-1-ol 186.1055 187.1138 113

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 238
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 237
Glyma.20G112900 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 236
Glyma.03G022900 hypothetical protein NA 235
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 235
Glyma.08G147300 hypothetical protein NA 233
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 233
Glyma.16G219700 hypothetical protein NA 233
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 232
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 232