Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P34126 1-Nitrohydroxyphenyl-N-benzoylalanine 330.0842 331.0929 121
P34165 Manilamine 282.1752 283.1828 121
P35261 valeryl 4-hydroxy valsartan 535.2720 536.2794 121
P36685 S-Formylmycothiol 514.1437 515.1516 121
P37725 PE(20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)/22:5(4Z,7Z,10Z,13Z,16Z)) 859.4946 860.4952 121
P40969 adipamide 144.0918 145.1001 121
P43405 Scutebarbatine H 469.2041 470.2102 121
P46239 Dymacrin D 438.3476 439.3533 121
P47087 N-(1,3-Dimethylbutyl)-N'-phenyl-p-phenylenediamine 268.1979 269.2062 121
P50181 Avermectin B1b monosaccharide 714.4022 715.4140 121

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 238
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 237
Glyma.20G112900 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 236
Glyma.03G022900 hypothetical protein NA 235
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 235
Glyma.08G147300 hypothetical protein NA 233
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 233
Glyma.16G219700 hypothetical protein NA 233
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 232
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 232