Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24109 3beta-Sulfooxy-7beta-N-acetylglucosaminylchol-5-en-24-oyltaurine 782.2913 783.3012 124
P24278 Aknadicine 345.1608 346.1691 124
P25509 Petunoside 786.2037 787.2111 124
P28666 11-Hydroxyaclacinomycin X 840.3304 841.3421 124
P29891 Ustilipid C 634.3999 635.4102 124
P30850 387.7083 388.7173 124
P32406 Amritoside B 588.2412 589.2511 124
P33884 Stephalonine G 541.2389 542.2484 124
P36856 920.2028 921.2079 124
P37516 Hoffmanniolide 878.4295 879.4342 124

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 238
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 237
Glyma.20G112900 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 236
Glyma.03G022900 hypothetical protein NA 235
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 235
Glyma.08G147300 hypothetical protein NA 233
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 233
Glyma.16G219700 hypothetical protein NA 233
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 232
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 232