Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54163 Isocordoin 308.1425 309.1479 —
P54166 606.9318 607.9399 —
P54168 Myo-inositol trispyrophosphate 605.8387 606.8451 —
P54175 359.5993 360.6060 —
P54176 607.7665 608.7746 —
P54177 Punicatannin C 660.1628 661.1707 —
P54178 Hanburinone 626.2705 627.2782 —
P54180 Demethyl-desacetyl-rifamycin S 639.2659 640.2773 —
P54182 605.7378 606.7434 —
P54183 2-N-Dodecyltetrahydrothiophene 256.2180 257.2245 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U039200 hypothetical protein AT4G08150:KNAT1:homeobox knotted-like protein 0
Glyma.U039300 hypothetical protein NA 0
Glyma.U039400 hypothetical protein NA 0
Glyma.U039500 hypothetical protein AT2G30320:AT2G30320:Pseudouridine synthase family protein 0
Glyma.U039600 hypothetical protein NA 0
Glyma.U039700 hypothetical protein NA 0
Glyma.U039800 hypothetical protein NA 0
Glyma.U039900 hypothetical protein NA 0
Glyma.U040000 hypothetical protein NA 0
Glyma.U040100 hypothetical protein AT5G16750:TOZ:Transducin family protein / WD-40 repeat family protein 0