Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54129 Humilinolide F 684.2723 685.2815 —
P54139 Norplicacetin 503.2367 504.2429 —
P54143 Arterolane 392.2651 393.2726 —
P54148 Nemifitide 694.3336 695.3409 —
P54150 Validamycin A 497.2145 498.2231 —
P54154 605.9010 606.9065 —
P54155 Fusicogigantone B 304.2387 305.2449 —
P54159 188.9923 190.0004 —
P54160 607.0585 608.0672 —
P54162 Benz(cd)indole-6-carboxamide, 4-(dipropylamino)-1,3,4,5-tetrahydro- 299.2013 599.4090 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U039200 hypothetical protein AT4G08150:KNAT1:homeobox knotted-like protein 0
Glyma.U039300 hypothetical protein NA 0
Glyma.U039400 hypothetical protein NA 0
Glyma.U039500 hypothetical protein AT2G30320:AT2G30320:Pseudouridine synthase family protein 0
Glyma.U039600 hypothetical protein NA 0
Glyma.U039700 hypothetical protein NA 0
Glyma.U039800 hypothetical protein NA 0
Glyma.U039900 hypothetical protein NA 0
Glyma.U040000 hypothetical protein NA 0
Glyma.U040100 hypothetical protein AT5G16750:TOZ:Transducin family protein / WD-40 repeat family protein 0