Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54387 2,4-Pyrimidinediamine, 5-(5-(1-piperazinylmethyl)-1,3,4-oxadiazol-2-yl)-N4-propyl-N2-(2-(4-pyridinyl)ethyl)- 423.2512 424.2592 —
P54394 275.9114 276.9192 —
P54395 Cladiellisin 320.2321 321.2388 —
P54398 394.3338 395.3377 —
P54400 1-(4-Hydroxyphenyl)-4,8-dimethyl-10-(2,6,6-trimethylcyclohexen-1-yl)deca-3,5,7,9-tetraen-2-one 390.2566 391.2648 —
P54404 Phenyl phosphonothioate 173.9912 174.9994 —
P54405 4'-Deoxykanokoside C 622.2536 623.2596 —
P54406 526.8642 527.8738 —
P54408 Dracunculifoside M 580.2829 581.2873 —
P54409 233.8899 234.8982 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U034200 hypothetical protein NA 0
Glyma.U034300 hypothetical protein AT2G28590:AT2G28590:Protein kinase superfamily protein__AT1G07870:AT1G07870:Protein kinase superfamily protein 0
Glyma.U034400 hypothetical protein NA 0
Glyma.U034500 hypothetical protein NA 0
Glyma.U034600 hypothetical protein NA 0
Glyma.U034700 hypothetical protein AT1G07880:ATMPK13:Protein kinase superfamily protein 0
Glyma.U034800 hypothetical protein NA 0
Glyma.U034900 hypothetical protein NA 0
Glyma.U035000 hypothetical protein NA 0
Glyma.U035100 hypothetical protein NA 0