Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11879 Corydine 341.1680 342.1746 101
P12514 Europine 329.1817 330.1892 101
P13233 2,4-Dihydroxy-7,8-dimethoxy-2H-1,4-benzoxazin-3(4H)-one 2-glucoside 403.1088 404.1166 101
P16389 Ethyl 2-amino-3-sulfanylpropanoate 149.0518 150.0596 101
P18122 4'-Chlorodiazepam 318.0334 319.0402 101
P18584 ES-242-3 620.2261 621.2341 101
P19850 821.3819 822.3908 101
P22731 7',8'-Dihydro-8'-hydroxycitraniaxanthin 488.3297 489.3372 101
P24616 2-hydroxy-tridecanoic acid 230.1855 231.1914 101
P24645 Altretamine 210.1573 211.1651 101

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U034200 hypothetical protein NA 0
Glyma.U034300 hypothetical protein AT2G28590:AT2G28590:Protein kinase superfamily protein__AT1G07870:AT1G07870:Protein kinase superfamily protein 0
Glyma.U034400 hypothetical protein NA 0
Glyma.U034500 hypothetical protein NA 0
Glyma.U034600 hypothetical protein NA 0
Glyma.U034700 hypothetical protein AT1G07880:ATMPK13:Protein kinase superfamily protein 0
Glyma.U034800 hypothetical protein NA 0
Glyma.U034900 hypothetical protein NA 0
Glyma.U035000 hypothetical protein NA 0
Glyma.U035100 hypothetical protein NA 0