Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55021 Tetracenomycin C 472.1013 473.1074 —
P55022 SR 12813 504.2425 505.2504 —
P55026 8-[(2R,3S)-3-(8-Hydroxyoctyl)oxiran-2-yl]octanoylcarnitine 457.3382 458.3473 —
P55028 2,6-Diamino-9-(2-hydroxyethoxymethyl)purine 224.1034 225.1102 —
P55032 {4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-phosphono-phenoxy}-acetic acid 637.2216 638.2342 —
P55037 Commodore 449.0956 450.1062 —
P55043 Sumarotene 382.1962 383.2035 —
P55044 Phthalic anhydride 148.0148 149.0220 —
P55045 1'-Carboxy-chondrochloren A 571.2569 572.2623 —
P55046 Saligcinnamide 490.3909 491.3987 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U033200 hypothetical protein AT1G07710:AT1G07710:Ankyrin repeat family protein 0
Glyma.U033300 hypothetical protein AT3G46220:AT3G46220:E3 UFM1-protein ligase-like protein 0
Glyma.U033400 hypothetical protein AT5G59710:VIP2:VIRE2 interacting protein 2 0
Glyma.U033500 hypothetical protein AT5G59700:AT5G59700:Protein kinase superfamily protein 0
Glyma.U033600 hypothetical protein NA 0
Glyma.U033700 hypothetical protein NA 0
Glyma.U033800 hypothetical protein NA 0
Glyma.U033900 hypothetical protein AT3G45850:AT3G45850:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.U034000 hypothetical protein AT5G60040:NRPC1:nuclear RNA polymerase C1 0
Glyma.U034100 hypothetical protein AT5G60050:AT5G60050:BTB/POZ domain-containing protein 0