Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54410 N-Arachidonoyl GABA 389.2988 390.3061 —
P54411 527.1413 528.1507 —
P54412 Triptregeline B 653.2534 654.2627 —
P54415 Rifamycin Z 651.2592 652.2653 —
P54417 250.9010 251.9081 —
P54419 112.9553 113.9626 —
P54423 3-Geranylgeranylindole 389.3058 390.3111 —
P54427 Rifamycin Z 651.2703 652.2784 —
P54431 3-Acetoxy-hexadecanoic acid 314.2431 315.2503 —
P54432 Hedychilactone A 318.2178 319.2245 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U033200 hypothetical protein AT1G07710:AT1G07710:Ankyrin repeat family protein 0
Glyma.U033300 hypothetical protein AT3G46220:AT3G46220:E3 UFM1-protein ligase-like protein 0
Glyma.U033400 hypothetical protein AT5G59710:VIP2:VIRE2 interacting protein 2 0
Glyma.U033500 hypothetical protein AT5G59700:AT5G59700:Protein kinase superfamily protein 0
Glyma.U033600 hypothetical protein NA 0
Glyma.U033700 hypothetical protein NA 0
Glyma.U033800 hypothetical protein NA 0
Glyma.U033900 hypothetical protein AT3G45850:AT3G45850:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.U034000 hypothetical protein AT5G60040:NRPC1:nuclear RNA polymerase C1 0
Glyma.U034100 hypothetical protein AT5G60050:AT5G60050:BTB/POZ domain-containing protein 0