Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54288 659.1659 660.1715 —
P54290 Candoxatrilat 399.2276 400.2346 —
P54291 Myo-inositol trispyrophosphate 605.8302 606.8356 —
P54292 606.8986 607.9083 —
P54293 428.3044 429.3130 —
P54294 Pinocembrin 7-O-benzoate 360.0994 361.1068 —
P54295 606.7501 607.7611 —
P54296 606.8928 607.8985 —
P54298 2,3-Dihydro-2,4,6-trimethyl-3-oxo-1H-indene-5-acetic acid 232.1088 233.1166 —
P54300 Hypochoeroside K 398.2301 399.2360 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U033200 hypothetical protein AT1G07710:AT1G07710:Ankyrin repeat family protein 0
Glyma.U033300 hypothetical protein AT3G46220:AT3G46220:E3 UFM1-protein ligase-like protein 0
Glyma.U033400 hypothetical protein AT5G59710:VIP2:VIRE2 interacting protein 2 0
Glyma.U033500 hypothetical protein AT5G59700:AT5G59700:Protein kinase superfamily protein 0
Glyma.U033600 hypothetical protein NA 0
Glyma.U033700 hypothetical protein NA 0
Glyma.U033800 hypothetical protein NA 0
Glyma.U033900 hypothetical protein AT3G45850:AT3G45850:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.U034000 hypothetical protein AT5G60040:NRPC1:nuclear RNA polymerase C1 0
Glyma.U034100 hypothetical protein AT5G60050:AT5G60050:BTB/POZ domain-containing protein 0