Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P52734 Bialaphos 323.1245 324.1307 101
P01015 Oxaburimamide 214.0929 215.1009 100
P01041 482.0337 483.0418 100
P02048 L-Glutamyl 5-phosphate 227.0189 228.0268 100
P04048 4-Nitroquinoline N-oxide 190.0393 191.0467 100
P04164 Elinafide 520.2115 521.2193 100
P08546 169.0440 170.0507 100
P09036 Delmadinone 360.1485 361.1545 100
P09294 2-Methoxybenzoic acid 152.0462 153.0536 100
P10487 Quercetin 3-(6'''-sinapylglucosyl)(1->2)-galactoside 832.2090 833.2224 100

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U033200 hypothetical protein AT1G07710:AT1G07710:Ankyrin repeat family protein 0
Glyma.U033300 hypothetical protein AT3G46220:AT3G46220:E3 UFM1-protein ligase-like protein 0
Glyma.U033400 hypothetical protein AT5G59710:VIP2:VIRE2 interacting protein 2 0
Glyma.U033500 hypothetical protein AT5G59700:AT5G59700:Protein kinase superfamily protein 0
Glyma.U033600 hypothetical protein NA 0
Glyma.U033700 hypothetical protein NA 0
Glyma.U033800 hypothetical protein NA 0
Glyma.U033900 hypothetical protein AT3G45850:AT3G45850:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.U034000 hypothetical protein AT5G60040:NRPC1:nuclear RNA polymerase C1 0
Glyma.U034100 hypothetical protein AT5G60050:AT5G60050:BTB/POZ domain-containing protein 0