Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55548 347.3085 348.3149 —
P55550 16-Methylheptadecanoylcarnitine 427.3718 428.3783 —
P55555 Pro-Pro-Phe 359.1790 360.1862 —
P55556 273.9162 274.9238 —
P55557 177.9525 178.9596 —
P55558 127.9526 128.9604 —
P55560 Evodone 164.0824 329.1720 —
P55562 Isomytiloxanthin 598.4011 599.4090 —
P55563 108.0105 109.0176 —
P55565 (-)-Tetrodecamycin 334.1416 335.1503 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U032200 hypothetical protein NA 0
Glyma.U032300 hypothetical protein AT5G03540:EXO70A1:exocyst subunit exo70 family protein A1 0
Glyma.U032400 hypothetical protein NA 0
Glyma.U032500 UR9 uricase-2 isozyme 1 AT2G26230:AT2G26230:uricase / urate oxidase / nodulin 35 0
Glyma.U032600 hypothetical protein NA 0
Glyma.U032700 hypothetical protein NA 0
Glyma.U032800 hypothetical protein AT3G52060:AT3G52060:core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0
Glyma.U032900 hypothetical protein NA 0
Glyma.U033000 hypothetical protein NA 0
Glyma.U033100 hypothetical protein AT3G46200:NUDT9:nudix hydrolase homolog 9 0