Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P29609 3,6-Dimethyl-1,4-dioxane-2,5-dione 144.0418 289.0912 118
P29808 Benzofuran ketone 144.0213 145.0278 118
P30820 Streptovaricin C 769.3197 770.3196 118
P32784 (3S)-7-Hydroxy-8,2',3',4',5'-pentamethoxyisoflavan 376.1503 377.1588 118
P34642 Adenolin D 422.2247 423.2291 118
P34893 Glomosporin 973.4902 974.5006 118
P35506 Heptanoylcholine 215.1858 216.1932 118
P35645 Endomorphin-1 610.2903 611.2985 118
P36728 Dihydroxytryptamine 192.0904 193.0976 118
P37690 Mono-trans-p-coumaroylmesotartaric acid 310.0668 311.0742 118

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U032200 hypothetical protein NA 0
Glyma.U032300 hypothetical protein AT5G03540:EXO70A1:exocyst subunit exo70 family protein A1 0
Glyma.U032400 hypothetical protein NA 0
Glyma.U032500 UR9 uricase-2 isozyme 1 AT2G26230:AT2G26230:uricase / urate oxidase / nodulin 35 0
Glyma.U032600 hypothetical protein NA 0
Glyma.U032700 hypothetical protein NA 0
Glyma.U032800 hypothetical protein AT3G52060:AT3G52060:core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0
Glyma.U032900 hypothetical protein NA 0
Glyma.U033000 hypothetical protein NA 0
Glyma.U033100 hypothetical protein AT3G46200:NUDT9:nudix hydrolase homolog 9 0