Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54243 4-(4-Fluorophenyl)-2-(4-nitrophenyl)-5-(4-pyridyl)-1H-imidazole 360.1011 361.1103 —
P54248 603.1243 604.1294 —
P54250 607.0535 608.0585 —
P54251 UDP-N-acetyl-D-mannosamine 607.0725 608.0805 —
P54252 N-(2-hydroxy-docosanoyl)-4E,6E-hexadecasphingadienine 607.5574 608.5648 —
P54253 (2S)-2-[(4-Methylphenyl)sulfonylamino]-3-[[4-oxo-5-(2-piperidin-4-ylethyl)-7,8-dihydro-6H-pyrazolo[1,5-a][1,4]diazepine-2-carbonyl]amino]propanoic acid 546.2259 547.2369 —
P54260 Lyngbyabellin C 608.0757 609.0866 —
P54261 605.9131 606.9149 —
P54266 351.5935 352.6015 —
P54267 607.8388 608.8458 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U030200 hypothetical protein AT4G07410:PCN:Transducin family protein / WD-40 repeat family protein 0
Glyma.U030300 hypothetical protein NA 0
Glyma.U030400 hypothetical protein AT5G25420:AT5G25420:Xanthine/uracil/vitamin C permease 0
Glyma.U030500 hypothetical protein AT1G27461:AT1G27461:uncharacterized protein 0
Glyma.U030600 hypothetical protein NA 0
Glyma.U030700 hypothetical protein AT3G12350:AT3G12350:F-box family protein 0
Glyma.U030800 hypothetical protein AT1G10200:WLIM1:GATA type zinc finger transcription factor family protein 0
Glyma.U030900 hypothetical protein AT1G59590:ZCF37:ZCF37 0
Glyma.U031000 ZCW7 protein AT1G59600:ZCW7:ZCW7 0
Glyma.U031100 hypothetical protein AT5G63905:AT5G63905:uncharacterized protein 0