Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P43147 Avermectin A2b monosaccharide 746.4252 747.4310 179
P43543 26-O-beta-D-glucopyranosyl-(25R)-furost-5,16(17),20(22)-trien-3beta,26-diol-3-O-alpha-l-rhamnopyranosyl-(1-2)-beta-D-glucopyranoside 882.4555 883.4653 179
P43704 3'''-O-Methylfukugetin 570.1129 571.1194 179
P53747 Methyl ent-16-methoxy-6-oxo-7,13E-labdadien-15-oate 362.2443 363.2517 179
P02880 183.5443 184.5519 178
P07726 Tolmetin glucuronide 433.1375 434.1439 178
P08737 3-Isopentadienyl-3',4,5'-trihydroxystilbene 294.1273 295.1337 178
P14990 Enkephalin L 555.2689 556.2764 178
P15582 853.3764 854.3854 178
P18621 (4Z,6Z)-Octa-4,6-dienoylcarnitine 283.1757 284.1837 178

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U030200 hypothetical protein AT4G07410:PCN:Transducin family protein / WD-40 repeat family protein 0
Glyma.U030300 hypothetical protein NA 0
Glyma.U030400 hypothetical protein AT5G25420:AT5G25420:Xanthine/uracil/vitamin C permease 0
Glyma.U030500 hypothetical protein AT1G27461:AT1G27461:uncharacterized protein 0
Glyma.U030600 hypothetical protein NA 0
Glyma.U030700 hypothetical protein AT3G12350:AT3G12350:F-box family protein 0
Glyma.U030800 hypothetical protein AT1G10200:WLIM1:GATA type zinc finger transcription factor family protein 0
Glyma.U030900 hypothetical protein AT1G59590:ZCF37:ZCF37 0
Glyma.U031000 ZCW7 protein AT1G59600:ZCW7:ZCW7 0
Glyma.U031100 hypothetical protein AT5G63905:AT5G63905:uncharacterized protein 0