Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11240 6-Benzylaminopurine 225.1038 226.1090 123
P15609 2-Isopropylfuran 110.0718 111.0795 123
P15845 Nigrospoxydon C 294.0747 295.0816 123
P17541 17-Ethynyl-16-fluoroestradiol 314.1689 315.1765 123
P17713 939.2673 940.2706 123
P20071 Melochinone 331.1571 332.1663 123
P26120 1,2-dinonanoyl-sn-glycero-3-phosphocholine 537.3455 538.3528 123
P30440 2-Isopropylfuran 110.0717 111.0792 123
P32052 Zanamivir 332.1327 333.1402 123
P33021 7-O-Methyl-N-deacetylipecoside 535.2335 536.2382 123

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U030200 hypothetical protein AT4G07410:PCN:Transducin family protein / WD-40 repeat family protein 0
Glyma.U030300 hypothetical protein NA 0
Glyma.U030400 hypothetical protein AT5G25420:AT5G25420:Xanthine/uracil/vitamin C permease 0
Glyma.U030500 hypothetical protein AT1G27461:AT1G27461:uncharacterized protein 0
Glyma.U030600 hypothetical protein NA 0
Glyma.U030700 hypothetical protein AT3G12350:AT3G12350:F-box family protein 0
Glyma.U030800 hypothetical protein AT1G10200:WLIM1:GATA type zinc finger transcription factor family protein 0
Glyma.U030900 hypothetical protein AT1G59590:ZCF37:ZCF37 0
Glyma.U031000 ZCW7 protein AT1G59600:ZCW7:ZCW7 0
Glyma.U031100 hypothetical protein AT5G63905:AT5G63905:uncharacterized protein 0