Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54666 3-Caffeoyl-4-feruloylquinic acid 530.1391 531.1460 147
P10107 Hygrocin B 507.1872 508.1911 146
P11442 Bunazosin 373.2181 374.2261 146
P15842 505.1794 506.1878 146
P20514 Pentacarboxyl porphyrinogen III 700.2711 701.2769 146
P21007 Notoamide S 435.2469 436.2553 146
P22172 593.9022 594.9029 146
P25341 Trifenmorph 329.1779 330.1831 146
P30652 Isonigerone 570.1436 571.1515 146
P31493 Clocinizine 402.1832 403.1902 146

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U027200 hypothetical protein AT3G42670:CHR38:chromatin remodeling 38__AT5G20420:CHR42:chromatin remodeling 42 0
Glyma.U027300 hypothetical protein AT5G01050:AT5G01050:Laccase/Diphenol oxidase family protein 0
Glyma.U027400 hypothetical protein AT5G01040:LAC8:laccase 8 0
Glyma.U027500 hypothetical protein AT3G09230:MYB1:myb domain protein 1 0
Glyma.U027600 hypothetical protein NA 0
Glyma.U027700 BSK6 AT3G54030:BSK6:kinase with tetratricopeptide repeat domain-containing protein 0
Glyma.U027800 hypothetical protein NA 0
Glyma.U027900 hypothetical protein AT3G54020:AtIPCS1:Inositol phosphorylceramide synthase 1 0
Glyma.U028000 hypothetical protein NA 0
Glyma.U028100 hypothetical protein NA 0