Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54185 704.3185 705.3247 —
P54186 Safranal 150.1027 301.2134 —
P54188 608.0268 609.0327 —
P54189 607.8181 608.8279 —
P54191 606.9062 607.9142 —
P54192 607.1163 608.1219 —
P54193 Boneratamide A 418.2851 419.2922 —
P54197 Pentazirinocyclodiphosphathiazene 362.0973 363.1056 —
P54198 6'''-Deamino-6'''-oxoparomomycin II 614.2627 615.2710 —
P54200 DG(16:0/0:0/18:2n6) 606.5249 607.5336 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U027200 hypothetical protein AT3G42670:CHR38:chromatin remodeling 38__AT5G20420:CHR42:chromatin remodeling 42 0
Glyma.U027300 hypothetical protein AT5G01050:AT5G01050:Laccase/Diphenol oxidase family protein 0
Glyma.U027400 hypothetical protein AT5G01040:LAC8:laccase 8 0
Glyma.U027500 hypothetical protein AT3G09230:MYB1:myb domain protein 1 0
Glyma.U027600 hypothetical protein NA 0
Glyma.U027700 BSK6 AT3G54030:BSK6:kinase with tetratricopeptide repeat domain-containing protein 0
Glyma.U027800 hypothetical protein NA 0
Glyma.U027900 hypothetical protein AT3G54020:AtIPCS1:Inositol phosphorylceramide synthase 1 0
Glyma.U028000 hypothetical protein NA 0
Glyma.U028100 hypothetical protein NA 0