Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11509 Asperlicin D 406.1430 407.1476 100
P11663 Trifuhalol B 390.0557 391.0624 100
P11969 Gravacridonolchlorine 375.0857 376.0932 100
P12097 p-Coumaroyl-malic acid 280.0570 281.0634 100
P12325 Amrubicin 483.1490 484.1548 100
P13447 Antibiotic TAN 585D 514.1701 515.1770 100
P15563 UR-12947 563.2211 564.2282 100
P16079 Funebral 237.0995 238.1055 100
P18868 Formosanatin A 520.2059 521.2147 100
P19512 Antibiotic 2088A 399.1431 400.1518 100

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U027200 hypothetical protein AT3G42670:CHR38:chromatin remodeling 38__AT5G20420:CHR42:chromatin remodeling 42 0
Glyma.U027300 hypothetical protein AT5G01050:AT5G01050:Laccase/Diphenol oxidase family protein 0
Glyma.U027400 hypothetical protein AT5G01040:LAC8:laccase 8 0
Glyma.U027500 hypothetical protein AT3G09230:MYB1:myb domain protein 1 0
Glyma.U027600 hypothetical protein NA 0
Glyma.U027700 BSK6 AT3G54030:BSK6:kinase with tetratricopeptide repeat domain-containing protein 0
Glyma.U027800 hypothetical protein NA 0
Glyma.U027900 hypothetical protein AT3G54020:AtIPCS1:Inositol phosphorylceramide synthase 1 0
Glyma.U028000 hypothetical protein NA 0
Glyma.U028100 hypothetical protein NA 0