Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P40427 Anzuroside 640.3421 641.3485 112
P41440 Thuja-2,4[10]-diene 134.1087 135.1156 112
P43015 Robustaflavone 7''-methyl ether 552.1039 553.1093 112
P46641 1-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-2-tetradecanoyl-glycero-3-phospho-(1'-myo-inositol) 830.4901 831.4964 112
P47211 [4-((1Z)-2-(Acetylamino)-3-{[1-(1,1'-biphenyl-4-ylmethyl)-2-oxoazepan-3-YL]amino}-3-oxoprop-1-enyl)-2-formylphenyl]acetic acid 567.2412 568.2503 112
P48131 Herbarumin II 244.1302 245.1383 112
P49348 Tirandamycin C 387.2085 388.2183 112
P50908 670.3678 671.3788 112
P50943 Chilocorine A 390.2704 391.2767 112
P04365 Monascorubramine 381.1953 382.2017 111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U027200 hypothetical protein AT3G42670:CHR38:chromatin remodeling 38__AT5G20420:CHR42:chromatin remodeling 42 0
Glyma.U027300 hypothetical protein AT5G01050:AT5G01050:Laccase/Diphenol oxidase family protein 0
Glyma.U027400 hypothetical protein AT5G01040:LAC8:laccase 8 0
Glyma.U027500 hypothetical protein AT3G09230:MYB1:myb domain protein 1 0
Glyma.U027600 hypothetical protein NA 0
Glyma.U027700 BSK6 AT3G54030:BSK6:kinase with tetratricopeptide repeat domain-containing protein 0
Glyma.U027800 hypothetical protein NA 0
Glyma.U027900 hypothetical protein AT3G54020:AtIPCS1:Inositol phosphorylceramide synthase 1 0
Glyma.U028000 hypothetical protein NA 0
Glyma.U028100 hypothetical protein NA 0