Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11794 Okaramine A 520.2462 521.2532 150
P15410 Epicoccin F 456.0445 457.0534 150
P17687 YC 170 487.1624 488.1707 150
P19015 Pentacarboxylporphyrin I 698.2651 699.2674 150
P19348 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1083 123.1158 150
P19926 563.2107 564.2191 150
P22333 (6E)-8-Oxogeraniol 168.1139 169.1209 150
P23057 Fantofarone 550.2490 551.2553 150
P25306 Ligujapone 202.1007 203.1090 150
P26391 Plusbacin A1 1129.5298 1130.5357 150

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U026200 hypothetical protein NA 0
Glyma.U026300 hypothetical protein NA 0
Glyma.U026400 hypothetical protein NA 0
Glyma.U026500 hypothetical protein AT5G13620:AT5G13620:uncharacterized protein 0
Glyma.U026600 hypothetical protein NA 0
Glyma.U026700 hypothetical protein NA 0
Glyma.U026800 hypothetical protein AT5G58870:ftsh9:FTSH protease 9 0
Glyma.U026900 Sec-independent periplasmic protein translocase NA 0
Glyma.U027000 hypothetical protein AT5G39000:AT5G39000:Malectin/receptor-like protein kinase family protein 0
Glyma.U027100 hypothetical protein AT5G38990:AT5G38990:Malectin/receptor-like protein kinase family protein 0