Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P04038 273.6501 274.6556 262
P17302 Candoxatrilat 399.2291 400.2364 262
P09522 1-Sinapoyl-2,2'-diferuloylgentiobiose 900.2729 901.2756 259
P39463 3-Methoxy-19-norpregna-1,3,5(10)-trien-20-one 312.2143 313.2233 259
P18970 Deoxypumiloside 496.1831 497.1903 257
P30042 939.4715 940.4808 257
P49351 3,16'-Dihydroxy-beta,chi-caroten-4-one 578.3786 579.3833 256
P19113 Lyngbyabellin E 863.2426 864.2468 255
P14677 S-(9-hydroxy-PGA1)-glutathione 645.3312 646.3359 254
P42876 Curassavioside D1 1020.5233 1021.5370 251

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U026200 hypothetical protein NA 0
Glyma.U026300 hypothetical protein NA 0
Glyma.U026400 hypothetical protein NA 0
Glyma.U026500 hypothetical protein AT5G13620:AT5G13620:uncharacterized protein 0
Glyma.U026600 hypothetical protein NA 0
Glyma.U026700 hypothetical protein NA 0
Glyma.U026800 hypothetical protein AT5G58870:ftsh9:FTSH protease 9 0
Glyma.U026900 Sec-independent periplasmic protein translocase NA 0
Glyma.U027000 hypothetical protein AT5G39000:AT5G39000:Malectin/receptor-like protein kinase family protein 0
Glyma.U027100 hypothetical protein AT5G38990:AT5G38990:Malectin/receptor-like protein kinase family protein 0