Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54303 2-Nitrophenyl a-D-galactopyranoside 301.0741 302.0788 —
P54304 605.9055 606.9104 —
P54305 607.5676 608.5741 —
P54309 607.6810 608.6914 —
P54310 607.0944 608.1038 —
P54311 606.8852 607.8900 —
P54312 Aminomethyl fluorescein 361.0992 362.1078 —
P54313 248.9014 249.9093 —
P54314 NADPH 745.0802 746.0889 —
P54315 Ceftolozane 666.1619 667.1682 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U025200 hypothetical protein NA 0
Glyma.U025300 hypothetical protein NA 0
Glyma.U025400 hypothetical protein AT1G08200:AXS2:UDP-D-apiose/UDP-D-xylose synthase 2 0
Glyma.U025500 hypothetical protein NA 0
Glyma.U025600 hypothetical protein AT3G15220:AT3G15220:Protein kinase superfamily protein 0
Glyma.U025700 hypothetical protein NA 0
Glyma.U025800 hypothetical protein NA 0
Glyma.U025900 hypothetical protein AT3G15260:AT3G15260:Protein phosphatase 2C family protein 0
Glyma.U026000 hypothetical protein NA 0
Glyma.U026100 hypothetical protein NA 0