Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P11739	THF-L-glutamate	574.2136	575.2230	144
P11990	Methyl 18-bromo-5,6-trans-endomethylene-7,11,15-trimethyl-8E,10Z-octadecadien-17-ynoate	422.1803	423.1876	144
P15141	N-(2-Methylbutyl)-2E-undecene-8,10-diynamide	245.1779	246.1853	144
P15383	(7R)-7-(5-Carboxy-5-oxopentanoyl)aminocephalosporinate	414.0740	415.0813	144
P23163	Urdamycinone F	504.1630	505.1692	144
P23229	Isariotin E	377.2268	378.2342	144
P24964		1066.3562	1067.3588	144
P27877	Pinocembrin 7-O-neohesperidoside 3'''-O-acetate	606.1949	607.2039	144
P33592		521.2494	522.2539	144
P34785	4'-(beta-D-Glucopyranosyloxy)-7',8'-dihydro-4,4'-diapo-psi,psi-caroten-4-oic acid	608.3368	609.3435	144

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.U024200
Glyma.U024300
Glyma.U024400
Glyma.U024500
Glyma.U024600	hypothetical protein	NA
Glyma.U024700	hypothetical protein	AT5G40670:AT5G40670:PQ-loop repeat family protein / transmembrane family protein
Glyma.U024800	hypothetical protein	NA
Glyma.U024900	hypothetical protein	AT5G53900:AT5G53900:Serine/threonine-protein kinase WNK (With No Lysine)-like protein
Glyma.U025000	hypothetical protein	NA
Glyma.U025100	hypothetical protein	AT2G38110:GPAT6:glycerol-3-phosphate acyltransferase 6