Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P39464 Arginylvaline 273.1778 274.1868 157
P46016 Lignan 238.1723 239.1780 157
P49105 Methyl camaralate 542.3555 543.3634 157
P50718 N-(9Z,12Z-octadecadienoyl)-taurine 387.2449 388.2513 157
P55581 Chlovalicin 332.1407 333.1480 157
P01915 Cardiospermin 275.0986 276.1051 156
P06888 Ethotoin 204.0868 205.0943 156
P08139 Goniolactone B 472.1526 473.1587 156
P12066 Sildenafil 474.2105 475.2149 156
P15974 Dihydro-3-methyl-2(3H)-furanone 100.0512 101.0588 156

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U024200 0
Glyma.U024300 0
Glyma.U024400 0
Glyma.U024500 0
Glyma.U024600 hypothetical protein NA 0
Glyma.U024700 hypothetical protein AT5G40670:AT5G40670:PQ-loop repeat family protein / transmembrane family protein 0
Glyma.U024800 hypothetical protein NA 0
Glyma.U024900 hypothetical protein AT5G53900:AT5G53900:Serine/threonine-protein kinase WNK (With No Lysine)-like protein 0
Glyma.U025000 hypothetical protein NA 0
Glyma.U025100 hypothetical protein AT2G38110:GPAT6:glycerol-3-phosphate acyltransferase 6 0