Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P02197	Ponticaepoxide	182.0745	183.0824	173
P09241		683.2025	684.2094	173
P12520	L-Leucine-p-nitroanilide	251.1255	252.1347	173
P16284		511.7656	512.7723	173
P20181	(2-Naphthyl)methanol	158.0725	159.0790	173
P22382	Diphenylcarbazide	242.1167	243.1217	173
P26425	Cinnacassiol	842.3264	843.3399	173
P29775	Galangin 5-methyl ether	284.0665	285.0738	173
P36562	Phthalsaurediethylhexylester	306.1814	613.3688	173
P38062	2,2'-Dinor-beta,beta-carotene-3,4,3',4'-tetrone	564.3207	565.3290	173

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.U024200
Glyma.U024300
Glyma.U024400
Glyma.U024500
Glyma.U024600	hypothetical protein	NA
Glyma.U024700	hypothetical protein	AT5G40670:AT5G40670:PQ-loop repeat family protein / transmembrane family protein
Glyma.U024800	hypothetical protein	NA
Glyma.U024900	hypothetical protein	AT5G53900:AT5G53900:Serine/threonine-protein kinase WNK (With No Lysine)-like protein
Glyma.U025000	hypothetical protein	NA
Glyma.U025100	hypothetical protein	AT2G38110:GPAT6:glycerol-3-phosphate acyltransferase 6