Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P34058	UDP-L-threo-4-pentosulose	374.0961	375.1020	197
P47411		548.7589	549.7687	197
P47617	(15Z)-15-Nitro-3,3'-dihydroxy-beta,beta-carotene-4,4'-dione	641.3622	642.3738	197
P13624	OR-1896	245.1148	246.1225	196
P17077	Goodyerin	776.2009	777.2050	196
P23832	Zanamivir	332.1323	333.1393	196
P34403	Theaflavic acid	428.0716	429.0795	196
P42118		677.3706	678.3757	196
P11897	2-Amino-3-(3-fluoro-4,5-dihydroxyphenyl)propanoic acid	215.0615	216.0681	195
P13878	5-Methoxy-3,4-methylenedioxyamphetamine	209.1074	210.1163	195

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.U024200
Glyma.U024300
Glyma.U024400
Glyma.U024500
Glyma.U024600	hypothetical protein	NA
Glyma.U024700	hypothetical protein	AT5G40670:AT5G40670:PQ-loop repeat family protein / transmembrane family protein
Glyma.U024800	hypothetical protein	NA
Glyma.U024900	hypothetical protein	AT5G53900:AT5G53900:Serine/threonine-protein kinase WNK (With No Lysine)-like protein
Glyma.U025000	hypothetical protein	NA
Glyma.U025100	hypothetical protein	AT2G38110:GPAT6:glycerol-3-phosphate acyltransferase 6