Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P52734 Bialaphos 323.1245 324.1307 101
P01015 Oxaburimamide 214.0929 215.1009 100
P01041 482.0337 483.0418 100
P02048 L-Glutamyl 5-phosphate 227.0189 228.0268 100
P04048 4-Nitroquinoline N-oxide 190.0393 191.0467 100
P04164 Elinafide 520.2115 521.2193 100
P08546 169.0440 170.0507 100
P09036 Delmadinone 360.1485 361.1545 100
P09294 2-Methoxybenzoic acid 152.0462 153.0536 100
P10487 Quercetin 3-(6'''-sinapylglucosyl)(1->2)-galactoside 832.2090 833.2224 100

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U024200 0
Glyma.U024300 0
Glyma.U024400 0
Glyma.U024500 0
Glyma.U024600 hypothetical protein NA 0
Glyma.U024700 hypothetical protein AT5G40670:AT5G40670:PQ-loop repeat family protein / transmembrane family protein 0
Glyma.U024800 hypothetical protein NA 0
Glyma.U024900 hypothetical protein AT5G53900:AT5G53900:Serine/threonine-protein kinase WNK (With No Lysine)-like protein 0
Glyma.U025000 hypothetical protein NA 0
Glyma.U025100 hypothetical protein AT2G38110:GPAT6:glycerol-3-phosphate acyltransferase 6 0