Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P23909		587.2916	588.2975	104
P24951	Homoarbutin	286.1030	287.1097	104
P25295	Okaramine A	520.2457	521.2517	104
P26205	N-Hydroxy-MeIQx	229.0943	230.1007	104
P26478	Asp-Tyr-Met-Gly-Trp-Met-Asp-Phe-NH2	1062.4017	1063.4055	104
P30265	Petromurin A	512.2328	513.2431	104
P30308	pyroglutamyl-histidyl-glycine	323.1237	324.1303	104
P32256	N-(7Z-tetradecenoyl)-homoserine lactone	309.2253	310.2342	104
P33709	UDP-L-threo-4-pentosulose	374.0967	375.1016	104
P34424	(-)-Brainic acid	514.1121	515.1181	104

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.U024200
Glyma.U024300
Glyma.U024400
Glyma.U024500
Glyma.U024600	hypothetical protein	NA
Glyma.U024700	hypothetical protein	AT5G40670:AT5G40670:PQ-loop repeat family protein / transmembrane family protein
Glyma.U024800	hypothetical protein	NA
Glyma.U024900	hypothetical protein	AT5G53900:AT5G53900:Serine/threonine-protein kinase WNK (With No Lysine)-like protein
Glyma.U025000	hypothetical protein	NA
Glyma.U025100	hypothetical protein	AT2G38110:GPAT6:glycerol-3-phosphate acyltransferase 6