Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P07022	Melrosin A	476.1705	477.1753	106
P10935	Acorafloxacin	419.1693	420.1730	106
P11923	Tyr-Val-Ala-Asp-chloromethyl ketone	498.1859	499.1895	106
P13185	N-Acetyl-serylaspartic acid	262.0810	263.0892	106
P16218		905.4256	906.4362	106
P16647	Loquatoside	438.1138	439.1203	106
P16934		405.5674	406.5711	106
P17618	Isopropyl phenylacetate	178.0981	179.1063	106
P17737	4'-Hydroxy-4-(4-hydroxystyryl)-7-methoxyflavan	374.1455	375.1552	106
P18372	N-Acetylphenylalanine beta-naphthyl ester	333.1364	334.1448	106

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.U024200
Glyma.U024300
Glyma.U024400
Glyma.U024500
Glyma.U024600	hypothetical protein	NA
Glyma.U024700	hypothetical protein	AT5G40670:AT5G40670:PQ-loop repeat family protein / transmembrane family protein
Glyma.U024800	hypothetical protein	NA
Glyma.U024900	hypothetical protein	AT5G53900:AT5G53900:Serine/threonine-protein kinase WNK (With No Lysine)-like protein
Glyma.U025000	hypothetical protein	NA
Glyma.U025100	hypothetical protein	AT2G38110:GPAT6:glycerol-3-phosphate acyltransferase 6