Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P43814 Tetradeca-6,9,12-trienedioylcarnitine 395.2323 396.2414 107
P49916 Xenortide A 409.2673 410.2756 107
P49933 Senbusine A 423.2591 424.2675 107
P54867 605.9887 606.9963 107
P01520 5-(Methoxymethyl)-1H-pyrrole-2-carbaldehyde 139.0615 140.0689 106
P01943 Diethylthiophosphoric acid 170.0187 171.0271 106
P02335 Chloroxine 212.9710 213.9777 106
P03819 2,3-Dihydro-2,3-dihydroxy-9-phenyl-1H-phenalen-1-one 290.0966 291.1043 106
P04725 Firocoxib 336.1053 337.1106 106
P06531 4-Anilino-4-oxobutanoic acid 193.0736 194.0795 106

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U024200 0
Glyma.U024300 0
Glyma.U024400 0
Glyma.U024500 0
Glyma.U024600 hypothetical protein NA 0
Glyma.U024700 hypothetical protein AT5G40670:AT5G40670:PQ-loop repeat family protein / transmembrane family protein 0
Glyma.U024800 hypothetical protein NA 0
Glyma.U024900 hypothetical protein AT5G53900:AT5G53900:Serine/threonine-protein kinase WNK (With No Lysine)-like protein 0
Glyma.U025000 hypothetical protein NA 0
Glyma.U025100 hypothetical protein AT2G38110:GPAT6:glycerol-3-phosphate acyltransferase 6 0