Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P48148	N-(15Z-tetracosenoyl) taurine	473.3565	474.3625	110
P49298	Glycyltyrosine	238.0921	239.0980	110
P52035	cis-Communal	286.2267	287.2342	110
P54535	(R)-6-(3-Methylpiperazin-1-yl)nicotinonitrile	202.1223	203.1291	110
P00974	Sertraline	305.0751	306.0843	109
P04848	Nitrobenzene	123.0319	124.0390	109
P06573	7-Hydroxyfluphenazine	453.1741	454.1800	109
P08590	Aspartyl-Aspartate	248.0653	249.0725	109
P09565	Fendosal	381.1405	382.1481	109
P10671	Endothal-disodium	186.0520	187.0588	109

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.U024200
Glyma.U024300
Glyma.U024400
Glyma.U024500
Glyma.U024600	hypothetical protein	NA
Glyma.U024700	hypothetical protein	AT5G40670:AT5G40670:PQ-loop repeat family protein / transmembrane family protein
Glyma.U024800	hypothetical protein	NA
Glyma.U024900	hypothetical protein	AT5G53900:AT5G53900:Serine/threonine-protein kinase WNK (With No Lysine)-like protein
Glyma.U025000	hypothetical protein	NA
Glyma.U025100	hypothetical protein	AT2G38110:GPAT6:glycerol-3-phosphate acyltransferase 6