Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P49283 1-[Fluoro(methoxy)phosphoryl]oxyicosa-5,8,11,14-tetraene 386.2397 387.2485 116
P52469 1-nonadecene-2,3R-dicarboxylic acid 354.2722 355.2780 116
P54014 N-Docosahexaenoyl Serine 415.2716 416.2775 116
P03881 1-Phenyl-1-cyclohexene 158.1087 159.1169 115
P03884 (2R,3R,4S,5R)-2-(Hydroxymethyl)-6-[(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxane-3,4,5-triol 326.1201 327.1263 115
P10074 Tamoxifen-N-glucuronide 547.2601 548.2664 115
P10859 Chlorhexidine 504.2037 505.2120 115
P11915 7-Oxostaurosporine 480.1801 481.1828 115
P15144 1-(4-Hydroxy-3,5-dimethoxyphenyl)-7-(4-hydroxy-3-methoxyphenyl)-3,5-heptanediol 406.1990 407.2051 115
P15201 Ternatoside D 611.2191 612.2258 115

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U024200 0
Glyma.U024300 0
Glyma.U024400 0
Glyma.U024500 0
Glyma.U024600 hypothetical protein NA 0
Glyma.U024700 hypothetical protein AT5G40670:AT5G40670:PQ-loop repeat family protein / transmembrane family protein 0
Glyma.U024800 hypothetical protein NA 0
Glyma.U024900 hypothetical protein AT5G53900:AT5G53900:Serine/threonine-protein kinase WNK (With No Lysine)-like protein 0
Glyma.U025000 hypothetical protein NA 0
Glyma.U025100 hypothetical protein AT2G38110:GPAT6:glycerol-3-phosphate acyltransferase 6 0