Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P23451 607.2766 608.2820 221
P05770 1-Methylpiperidin-4-yl butanoate 185.1403 186.1473 220
P09835 10-Formyldihydrofolate 471.1494 472.1544 220
P10595 317.1915 318.1977 220
P12478 5,7-octadienoic acid 140.0839 141.0905 220
P19868 Cohaerin C 482.2267 483.2355 220
P30782 Cryptostigmin IV 1030.4967 1031.5022 220
P40362 BL V 424.0812 425.0898 220
P44001 839.4221 840.4307 220
P05350 Methylinoscavin B 450.1344 451.1421 219

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U024200 0
Glyma.U024300 0
Glyma.U024400 0
Glyma.U024500 0
Glyma.U024600 hypothetical protein NA 0
Glyma.U024700 hypothetical protein AT5G40670:AT5G40670:PQ-loop repeat family protein / transmembrane family protein 0
Glyma.U024800 hypothetical protein NA 0
Glyma.U024900 hypothetical protein AT5G53900:AT5G53900:Serine/threonine-protein kinase WNK (With No Lysine)-like protein 0
Glyma.U025000 hypothetical protein NA 0
Glyma.U025100 hypothetical protein AT2G38110:GPAT6:glycerol-3-phosphate acyltransferase 6 0