Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P37887 Starch acetate 306.0940 307.1009 207
P41794 Xylogranatin A 642.2652 643.2735 207
P50979 261.2154 262.2224 207
P55337 Fagopyrine 670.2326 671.2406 207
P18076 (S)-4-(2,4-Difluoro-5-(pyrimidin-5-yl)phenyl)-4-methyl-5,6-dihydro-4H-1,3-thiazin-2-amine 320.0919 321.0978 206
P24832 Stercobilin 594.3421 595.3505 206
P37255 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3399 455.3477 206
P08444 (1R,6S)-6-Amino-5-oxocyclohex-2-ene-1-carboxylate 155.0591 156.0664 205
P13362 Quercetin 3-coumaroyl-triglucoside 488.1517 489.1566 205
P15731 HDMBOA-Glc 387.1176 388.1224 205

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U023200 0
Glyma.U023300 0
Glyma.U023400 0
Glyma.U023500 0
Glyma.U023600 0
Glyma.U023700 0
Glyma.U023800 0
Glyma.U023900 0
Glyma.U024000 0
Glyma.U024100 0