Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54650 Indane 118.0771 119.0836 —
P54653 N-(Sulfonatooxy)prop-2-enimidothioate 196.9830 197.9910 —
P54661 163.9741 164.9816 —
P54663 231.9051 232.9122 —
P54664 Kupitengester 1 637.2585 638.2677 —
P54665 6-Decenoylcarnitine 313.2232 627.4555 —
P54667 Tonapofylline 488.1209 489.1259 —
P54668 239.2316 240.2383 —
P54670 604.0611 605.0630 —
P54678 Calix[6]arene 636.2522 637.2633 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U006200 hypothetical protein NA 0
Glyma.U006300 hypothetical protein AT5G17620:AUG7:nuclear matrix protein 0
Glyma.U006400 hypothetical protein NA 0
Glyma.U006500 hypothetical protein NA 0
Glyma.U006600 hypothetical protein NA 0
Glyma.U006700 hypothetical protein AT2G44300:AT2G44300:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0
Glyma.U006800 hypothetical protein AT3G07370:CHIP:carboxyl terminus of HSC70-interacting protein 0
Glyma.U006900 hypothetical protein AT2G44300:AT2G44300:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0
Glyma.U007000 hypothetical protein AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 0
Glyma.U007100 hypothetical protein NA 0