Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P32263 4-Hydroxydemethylmedicarpin 272.0676 273.0760 147
P33257 2,5-Diisopropyl-3-methylphenol 192.1493 193.1574 147
P36560 10-Hydroxy-cadin-4-en-3-one 236.1744 473.3583 147
P43847 Didemniserinolipid B 663.4039 664.4119 147
P44113 645.4166 646.4222 147
P45062 Valylproline 214.1328 215.1400 147
P46904 455.6709 456.6799 147
P47349 797.9366 798.9377 147
P47397 Prolyl-Arginine 271.1624 272.1709 147
P51669 353.1550 354.1626 147

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U001200 hypothetical protein NA 0
Glyma.U001300 hypothetical protein NA 0
Glyma.U001400 hypothetical protein NA 0
Glyma.U001500 hypothetical protein AT1G30530:UGT78D1:UDP-glucosyl transferase 78D1 0
Glyma.U001600 hypothetical protein NA 0
Glyma.U001700 hypothetical protein AT3G47790:ABCA8:ABC2 homolog 7__AT3G47750:ABCA4:ATP binding cassette subfamily A4 0
Glyma.U001800 hypothetical protein NA 0
Glyma.U001900 hypothetical protein AT1G15000:scpl50:serine carboxypeptidase-like 50 0
Glyma.U002000 hypothetical protein NA 0
Glyma.U002100 hypothetical protein NA 0