Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P15743 Gentisic acid 154.0271 155.0336 110
P16472 1-Phenylcyclohexylamine 175.1387 176.1455 110
P17340 Sibutramine 279.1747 280.1823 110
P17730 Pterosin N 234.1254 235.1318 110
P19937 3''-Adenylylspectinomycin 661.2024 662.2072 110
P20545 Polanrazine D 347.1319 348.1409 110
P23243 14-Acetoxy-15-hydroxygelsenicine 400.1637 401.1729 110
P23669 3-Oxopentanoylcarnitine 259.1408 260.1471 110
P24572 Saframycin R 622.2276 623.2373 110
P24629 Phaseolic acid 296.0558 297.0621 110

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U001200 hypothetical protein NA 0
Glyma.U001300 hypothetical protein NA 0
Glyma.U001400 hypothetical protein NA 0
Glyma.U001500 hypothetical protein AT1G30530:UGT78D1:UDP-glucosyl transferase 78D1 0
Glyma.U001600 hypothetical protein NA 0
Glyma.U001700 hypothetical protein AT3G47790:ABCA8:ABC2 homolog 7__AT3G47750:ABCA4:ATP binding cassette subfamily A4 0
Glyma.U001800 hypothetical protein NA 0
Glyma.U001900 hypothetical protein AT1G15000:scpl50:serine carboxypeptidase-like 50 0
Glyma.U002000 hypothetical protein NA 0
Glyma.U002100 hypothetical protein NA 0