Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P01785 428.0342 429.0403 137
P03606 N-(gamma-Glutamyl)ethanolamine 190.0927 191.1000 137
P09770 (E)-Methyl-4-hydroxycinnamate 178.0624 179.0690 137
P12839 2S-(6,12-dichloro-dodecanoyloxy)-propanoic acid 340.1245 341.1322 137
P16672 (+)-(R)-(E)-3'-Hydroxyartemidin 216.0801 217.0867 137
P17329 3,5,5-Trimethyl-1,2-cyclohexanedione 154.0982 155.1055 137
P23820 Teucrolin D 438.1882 439.1937 137
P24445 Isobetanidin-6-O-beta-sophoroside 712.2079 713.2204 137
P24826 Actinoplanone G 618.1737 619.1789 137
P32466 Anadur 506.3394 507.3483 137

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G249300 CYP10 peptidyl-prolyl cis-trans isomerase CYP10 AT5G13120:Pnsl5:cyclophilin 20-2 0
Glyma.20G249400 hypothetical protein NA 0
Glyma.20G249500 hypothetical protein AT5G13150:EXO70C1:exocyst subunit exo70 family protein C1 0
Glyma.20G249600 hypothetical protein AT5G13160:PBS1:Protein kinase superfamily protein 0
Glyma.20G249700 DNA repair RAD52-like protein 2, chloroplastic AT5G47870:RAD52-2:cobalt ion-binding protein 0
Glyma.20G249800 hypothetical protein AT1G28140:AT1G28140:integral membrane family protein 0
Glyma.20G249900 hypothetical protein AT2G33550:AT2G33550:Homeodomain-like superfamily protein 0
Glyma.20G250100 hypothetical protein NA 0
Glyma.20G250200 hypothetical protein AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein 0
Glyma.U000100 hypothetical protein NA 0