Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P29285 | 3-[4-[1-(4-Hydroxy-3-methoxyphenyl)-1,3-dihydroxyisopropoxy]-2-hydroxyphenyl]propyl alpha-L-rhamnopyranoside | 510.2086 | 511.2157 | 185 |
| P31235 | Ethambutol | 204.1849 | 205.1923 | 185 |
| P31826 | TR-Saponin A | 1008.5123 | 1009.5185 | 185 |
| P36240 | IM-2 | 188.1084 | 189.1154 | 185 |
| P05741 | Nitrogen mustard N-oxide | 171.0221 | 172.0306 | 184 |
| P10145 | Aspergilone A | 386.1900 | 387.1946 | 184 |
| P13070 | TM 64 | 314.1218 | 315.1319 | 184 |
| P23629 | Cycloshizukaol A | 548.2409 | 549.2477 | 184 |
| P24680 | (2S)-2-Hexylsulfanyl-N-[6-methyl-2,4-bis(methylsulfanyl)pyridin-3-yl]decanamide | 470.2431 | 471.2495 | 184 |
| P25345 | Fura-2 | 641.1548 | 642.1653 | 184 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.20G249300 | CYP10 | peptidyl-prolyl cis-trans isomerase CYP10 | AT5G13120:Pnsl5:cyclophilin 20-2 | 0 |
| Glyma.20G249400 | hypothetical protein | NA | 0 | |
| Glyma.20G249500 | hypothetical protein | AT5G13150:EXO70C1:exocyst subunit exo70 family protein C1 | 0 | |
| Glyma.20G249600 | hypothetical protein | AT5G13160:PBS1:Protein kinase superfamily protein | 0 | |
| Glyma.20G249700 | DNA repair RAD52-like protein 2, chloroplastic | AT5G47870:RAD52-2:cobalt ion-binding protein | 0 | |
| Glyma.20G249800 | hypothetical protein | AT1G28140:AT1G28140:integral membrane family protein | 0 | |
| Glyma.20G249900 | hypothetical protein | AT2G33550:AT2G33550:Homeodomain-like superfamily protein | 0 | |
| Glyma.20G250100 | hypothetical protein | NA | 0 | |
| Glyma.20G250200 | hypothetical protein | AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein | 0 | |
| Glyma.U000100 | hypothetical protein | NA | 0 |