Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P32890 2-Hydroxy-3-[(2-carboxyethyl)thio]-3-[2-(8-phenyloctyl)phenyl]propanoic acid 458.2131 459.2212 166
P35009 15-Veratroylgermine 673.3400 674.3443 166
P36333 Paniculidine B 233.1418 234.1491 166
P36634 beta-Casomorphin-7 692.3563 693.3642 166
P43004 889.4915 890.4974 166
P45760 Buxmicrophylline H 598.3926 599.4015 166
P52097 3',5-Dihydroxy-3,4,4'-trimethoxybibenzyl-5-O-glucoside 466.1835 467.1909 166
P00872 Styelsamine B 319.1298 320.1358 165
P01816 9H-Purine-9-ol 136.0401 137.0478 165
P03713 Chlordiazepoxide 299.0822 300.0898 165

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G248200 hypothetical protein NA 0
Glyma.20G248300 hypothetical protein NA 0
Glyma.20G248400 hypothetical protein AT2G43110:AT2G43110:U3 containing 90S pre-ribosomal complex subunit 0
Glyma.20G248600 hypothetical protein NA 0
Glyma.20G248700 hypothetical protein AT5G48485:DIR1:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0
Glyma.20G248800 KU70 AT1G16970:KU70:ATP-dependent DNA helicase 2 subunit Ku70-like protein 0
Glyma.20G248900 hypothetical protein NA 0
Glyma.20G249000 hypothetical protein NA 0
Glyma.20G249100 hypothetical protein AT5G63440:AT5G63440: 0
Glyma.20G249200 hypothetical protein NA 0