Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P13475 594.1775 595.1805 108
P14241 201.0613 202.0698 108
P14315 Minwanensin 284.1580 285.1661 108
P14914 539.6069 540.6145 108
P17163 3',4'-Dihydroxy-7-methoxy-8-(3-methylbut-2-enyl)-2'''-(1-hydroxy-1-methylethyl)-furano-(4'',5'':6,5)favanone 452.1782 453.1867 108
P17316 Camicinal 424.2651 425.2723 108
P19987 Juncin K 706.3311 707.3423 108
P20676 3,4,7-Trihydroxy-5-methoxy-8-prenylflavan 4-O-(beta-D-xylopyranosyl-(1->6)-beta-D-glucopyranoside) 666.2435 667.2535 108
P21070 Guvacoline 141.0788 142.0851 108
P21615 4-[(E)-2-(7-Heptoxy-4,4-dimethyl-1,1-dioxo-2,3-dihydrothiochromen-6-yl)prop-1-enyl]benzoic acid 484.2258 485.2336 108

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G248200 hypothetical protein NA 0
Glyma.20G248300 hypothetical protein NA 0
Glyma.20G248400 hypothetical protein AT2G43110:AT2G43110:U3 containing 90S pre-ribosomal complex subunit 0
Glyma.20G248600 hypothetical protein NA 0
Glyma.20G248700 hypothetical protein AT5G48485:DIR1:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0
Glyma.20G248800 KU70 AT1G16970:KU70:ATP-dependent DNA helicase 2 subunit Ku70-like protein 0
Glyma.20G248900 hypothetical protein NA 0
Glyma.20G249000 hypothetical protein NA 0
Glyma.20G249100 hypothetical protein AT5G63440:AT5G63440: 0
Glyma.20G249200 hypothetical protein NA 0