Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P26418	Antibiotic 273a1alpha	1112.3282	1113.3409	231
P30811		767.2566	768.2643	231
P04078		311.5769	312.5829	230
P14825	9R-hydroxy-2E,4E-decadienoic acid	184.1086	185.1164	230
P17592		175.1437	176.1505	230
P31714	4,4'-Dihydroxystilbene	212.0832	213.0898	230
P20017		343.2428	344.2506	229
P21903	Triptregeline H	611.2282	612.2377	229
P31991	Irroratin A	378.2030	379.2088	229
P26216	trans-2-Enoyl-OPC6-CoA	1013.2870	1014.2977	228

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G247200	hypothetical protein	AT3G20760:AT3G20760:Nse4, component of Smc5/6 DNA repair complex
Glyma.20G247300	hypothetical protein	AT1G51120:AT1G51120:AP2/B3 transcription factor family protein__AT1G50680:AT1G50680:AP2/B3 transcription factor family protein
Glyma.20G247400	hypothetical protein	AT5G19640:AT5G19640:Major facilitator superfamily protein
Glyma.20G247500	hypothetical protein	NA
Glyma.20G247600	hypothetical protein	AT3G59310:AT3G59310:solute carrier family 35 protein (DUF914)
Glyma.20G247700	hypothetical protein	AT3G59290:AT3G59290:ENTH/VHS family protein
Glyma.20G247800	hypothetical protein	NA
Glyma.20G247900	hypothetical protein	NA
Glyma.20G248000	hypothetical protein	AT1G05790:AT1G05790:lipase class 3 family protein
Glyma.20G248100	Transcription factor bHLH128	NA