Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55327 8,8''-Biskoenigine 616.2599 617.2636 —
P55329 607.7540 608.7639 —
P55341 Tetraphenylporphyrin 614.2471 615.2555 —
P55343 624.9928 625.9968 —
P55350 609.0479 610.0613 —
P55357 339.0868 340.0942 —
P55361 Aerobactin 564.2333 565.2435 —
P55362 L-gamma-Glutamyl-beta-phenyl-beta-L-alanine 294.1177 295.1250 —
P55363 331.5836 332.5907 —
P55366 Dexrazoxane 268.1177 269.1254 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G247200 hypothetical protein AT3G20760:AT3G20760:Nse4, component of Smc5/6 DNA repair complex 0
Glyma.20G247300 hypothetical protein AT1G51120:AT1G51120:AP2/B3 transcription factor family protein__AT1G50680:AT1G50680:AP2/B3 transcription factor family protein 0
Glyma.20G247400 hypothetical protein AT5G19640:AT5G19640:Major facilitator superfamily protein 0
Glyma.20G247500 hypothetical protein NA 0
Glyma.20G247600 hypothetical protein AT3G59310:AT3G59310:solute carrier family 35 protein (DUF914) 0
Glyma.20G247700 hypothetical protein AT3G59290:AT3G59290:ENTH/VHS family protein 0
Glyma.20G247800 hypothetical protein NA 0
Glyma.20G247900 hypothetical protein NA 0
Glyma.20G248000 hypothetical protein AT1G05790:AT1G05790:lipase class 3 family protein 0
Glyma.20G248100 Transcription factor bHLH128 NA 0