Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55199 Neoechinulin 391.1908 392.1990 —
P55200 Oxybuprocaine 308.2048 617.4153 —
P55202 Triptregeline B 653.2490 654.2596 —
P55204 Monascorubramine 381.1973 382.2060 —
P55205 PA(20:4(5Z,8Z,11Z,14Z)/14:1(9Z)) 666.4297 667.4397 —
P55208 Menaquinol 310.1940 311.2013 —
P55211 391.3353 392.3429 —
P55212 (5Z,9Z)-2-methoxy-5,9-hexacosadienoic acid 422.3731 423.3810 —
P55213 Indocarbazostatin D 512.1345 513.1415 —
P55216 160.9605 161.9681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G247200 hypothetical protein AT3G20760:AT3G20760:Nse4, component of Smc5/6 DNA repair complex 0
Glyma.20G247300 hypothetical protein AT1G51120:AT1G51120:AP2/B3 transcription factor family protein__AT1G50680:AT1G50680:AP2/B3 transcription factor family protein 0
Glyma.20G247400 hypothetical protein AT5G19640:AT5G19640:Major facilitator superfamily protein 0
Glyma.20G247500 hypothetical protein NA 0
Glyma.20G247600 hypothetical protein AT3G59310:AT3G59310:solute carrier family 35 protein (DUF914) 0
Glyma.20G247700 hypothetical protein AT3G59290:AT3G59290:ENTH/VHS family protein 0
Glyma.20G247800 hypothetical protein NA 0
Glyma.20G247900 hypothetical protein NA 0
Glyma.20G248000 hypothetical protein AT1G05790:AT1G05790:lipase class 3 family protein 0
Glyma.20G248100 Transcription factor bHLH128 NA 0