Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P54539 | Sophoraflavanone J | 650.2518 | 651.2584 | — |
| P54548 | (R)-6-(3-Methylpiperazin-1-yl)nicotinonitrile | 202.1257 | 203.1332 | — |
| P54552 | 119.0802 | 120.0872 | — | |
| P54557 | Styrene | 104.0616 | 105.0687 | — |
| P54565 | 257.2589 | 258.2663 | — | |
| P54569 | 128.9610 | 129.9684 | — | |
| P54571 | 1-(9Z-nonadecenoyl)-glycero-3-phosphate | 450.2730 | 451.2794 | — |
| P54575 | 109.0076 | 110.0149 | — | |
| P54581 | 360.8103 | 361.8184 | — | |
| P54587 | 3-Methoxy-19-norpregna-1,3,5(10)-trien-20-one | 312.2077 | 313.2144 | — |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.20G247200 | hypothetical protein | AT3G20760:AT3G20760:Nse4, component of Smc5/6 DNA repair complex | 0 | |
| Glyma.20G247300 | hypothetical protein | AT1G51120:AT1G51120:AP2/B3 transcription factor family protein__AT1G50680:AT1G50680:AP2/B3 transcription factor family protein | 0 | |
| Glyma.20G247400 | hypothetical protein | AT5G19640:AT5G19640:Major facilitator superfamily protein | 0 | |
| Glyma.20G247500 | hypothetical protein | NA | 0 | |
| Glyma.20G247600 | hypothetical protein | AT3G59310:AT3G59310:solute carrier family 35 protein (DUF914) | 0 | |
| Glyma.20G247700 | hypothetical protein | AT3G59290:AT3G59290:ENTH/VHS family protein | 0 | |
| Glyma.20G247800 | hypothetical protein | NA | 0 | |
| Glyma.20G247900 | hypothetical protein | NA | 0 | |
| Glyma.20G248000 | hypothetical protein | AT1G05790:AT1G05790:lipase class 3 family protein | 0 | |
| Glyma.20G248100 | Transcription factor bHLH128 | NA | 0 |