Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P05722	(-)-Echinobetaine A	175.1198	176.1263	111
P06706	Nitrazine	233.1234	234.1308	111
P06915		682.1883	683.1935	111
P08742		153.0759	154.0846	111
P09330	Aclatonium	217.1286	218.1356	111
P09922	Voxelotor	337.1410	338.1475	111
P11202		577.1808	578.1882	111
P11491	Kaempferol 7,4'-dimethyl ether 3-O-sulfate	394.0315	395.0366	111
P11603	HC 70III	455.2224	456.2292	111
P12384	2-(4-methoxyphenyl)ethanol	152.0846	153.0919	111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G247200	hypothetical protein	AT3G20760:AT3G20760:Nse4, component of Smc5/6 DNA repair complex
Glyma.20G247300	hypothetical protein	AT1G51120:AT1G51120:AP2/B3 transcription factor family protein__AT1G50680:AT1G50680:AP2/B3 transcription factor family protein
Glyma.20G247400	hypothetical protein	AT5G19640:AT5G19640:Major facilitator superfamily protein
Glyma.20G247500	hypothetical protein	NA
Glyma.20G247600	hypothetical protein	AT3G59310:AT3G59310:solute carrier family 35 protein (DUF914)
Glyma.20G247700	hypothetical protein	AT3G59290:AT3G59290:ENTH/VHS family protein
Glyma.20G247800	hypothetical protein	NA
Glyma.20G247900	hypothetical protein	NA
Glyma.20G248000	hypothetical protein	AT1G05790:AT1G05790:lipase class 3 family protein
Glyma.20G248100	Transcription factor bHLH128	NA