Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54862 605.8809 606.8893 —
P54863 605.7784 606.7828 —
P54866 LY201116 240.1275 241.1348 —
P54869 671.1572 672.1693 —
P54870 2-Isopropylfuran 110.0722 221.1514 —
P54871 Candesartan cilexetil 610.2520 611.2601 —
P54872 Kadsurenin B 342.1516 343.1605 —
P54873 689.1570 690.1664 —
P54874 606.9143 607.9211 —
P54875 Orthosiphol L 692.2803 693.2898 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G245900 hypothetical protein AT2G43235:AT2G43235:phosphoribosylformylglycinamidine synthase 0
Glyma.20G246000 hypothetical protein NA 0
Glyma.20G246100 hypothetical protein AT3G59360:UTR6:UDP-galactose transporter 6__AT2G43240:AT2G43240:Nucleotide-sugar transporter family protein 0
Glyma.20G246300 hypothetical protein AT2G43330:INT1:inositol transporter 1 0
Glyma.20G246500 hypothetical protein AT2G43330:INT1:inositol transporter 1 0
Glyma.20G246600 hypothetical protein NA 0
Glyma.20G246700 hypothetical protein NA 0
Glyma.20G246800 hypothetical protein AT5G13030:AT5G13030:selenoprotein O 0
Glyma.20G246900 hypothetical protein AT5G13020:EML3:Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein 0
Glyma.20G247100 hypothetical protein NA 0