Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P38174	Azaspiracid 13	859.4835	860.4922	240
P40405		659.3981	660.4063	239
P00636		157.9538	158.9609	238
P12469	2,5-Dimethylfuran	96.0568	97.0643	238
P22595	Mucronulatol-(4->5')-vestitol	572.1981	573.2085	238
P38652	Mollicellin M	416.0708	417.0813	238
P14214	Decarbamoylgonyautoxin 1	368.0761	369.0806	237
P22578		583.1306	584.1392	237
P30643	Tetralin	132.0926	133.1001	237
P13409		706.1236	707.1314	236

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G244100	Leucine aminopeptidase	AT5G13520:AT5G13520:peptidase M1 family protein
Glyma.20G244300	hypothetical protein	AT3G12620:AT3G12620:Protein phosphatase 2C family protein__AT3G55050:AT3G55050:Protein phosphatase 2C family protein
Glyma.20G244500	hypothetical protein	AT1G51110:AT1G51110:Plastid-lipid associated protein PAP / fibrillin family protein
Glyma.20G244600	hypothetical protein	NA
Glyma.20G244700	hypothetical protein	AT5G19900:AT5G19900:PRLI-interacting factor
Glyma.20G244800	hypothetical protein	AT5G13000:GSL12:glucan synthase-like 12
Glyma.20G245200	hypothetical protein	NA
Glyma.20G245500	hypothetical protein	AT4G14800:PBD2:20S proteasome beta subunit D2__AT3G22630:PBD1:20S proteasome beta subunit D1
Glyma.20G245700	hypothetical protein	NA
Glyma.20G245800	hypothetical protein	NA