Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54709 Lophophorine 235.1212 236.1274 —
P54710 Phelligridin H 622.0684 623.0733 —
P54712 6'-O-alpha-D-Xylopyranosylalangiside 637.2291 638.2378 —
P54713 Darapladib 666.2681 667.2752 —
P54715 136.9595 137.9670 —
P54716 Isorenieratene 528.3755 529.3822 —
P54717 113.9690 114.9770 —
P54718 232.6162 233.6249 —
P54720 Bidenoside C 310.1412 311.1496 —
P54721 (5Z,7E)-(1S,3R)-18-[m-(1-hydroxy-1-ethylpropyl)-benzyloxy]-23,24-dinor-9,10-seco-5,7,10(19)-cholatriene-1,3-diol 522.3738 523.3791 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G244100 Leucine aminopeptidase AT5G13520:AT5G13520:peptidase M1 family protein 0
Glyma.20G244300 hypothetical protein AT3G12620:AT3G12620:Protein phosphatase 2C family protein__AT3G55050:AT3G55050:Protein phosphatase 2C family protein 0
Glyma.20G244500 hypothetical protein AT1G51110:AT1G51110:Plastid-lipid associated protein PAP / fibrillin family protein 0
Glyma.20G244600 hypothetical protein NA 0
Glyma.20G244700 hypothetical protein AT5G19900:AT5G19900:PRLI-interacting factor 0
Glyma.20G244800 hypothetical protein AT5G13000:GSL12:glucan synthase-like 12 0
Glyma.20G245200 hypothetical protein NA 0
Glyma.20G245500 hypothetical protein AT4G14800:PBD2:20S proteasome beta subunit D2__AT3G22630:PBD1:20S proteasome beta subunit D1 0
Glyma.20G245700 hypothetical protein NA 0
Glyma.20G245800 hypothetical protein NA 0